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DVU_0526 DVU_0526 DVU_0525 DVU_0525 DVU_1290 DVU_1290 DVU_1500 DVU_1500 DVU_0734 DVU_0734 DVU_0532 DVU_0532 DVU_0265 DVU_0265 DVU_0528 DVU_0528 maF maF DVU_0524 DVU_0524 DVU_2484 DVU_2484
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0526Drug resistance transporter, putative; Identified by similarity to OMNI:NTL02MA1611. (467 aa)    
Predicted Functional Partners:
DVU_0525
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
  
 0.784
DVU_1290
Nitrate reductase, gamma subunit, putative; Identified by match to protein family HMM PF02665.
  
  
 0.658
DVU_1500
Major capsid protein, HK97 family; Identified by match to protein family HMM TIGR01554.
   
    0.611
DVU_0734
Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.
  
  
 0.606
DVU_0532
Hmc operon protein 5; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates.
  
  
 0.542
DVU_0265
Membrane protein, putative.
  
  
 0.534
DVU_0528
Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
  
    0.534
maF
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
    0.532
DVU_0524
Hypothetical protein; Identified by Glimmer2; putative.
       0.481
DVU_2484
Identified by match to protein family HMM PF00034.
  
   
 0.481
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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