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DVU_0552 DVU_0552 DVU_0117 DVU_0117 DVU_0076 DVU_0076 DVU_2993 DVU_2993 DVU_2994 DVU_2994 DVU_0134 DVU_0134 DVU_2354 DVU_2354 DVU_0327 DVU_0327 DVU_0281 DVU_0281 galE galE DVU_0549 DVU_0549
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0552Conserved hypothetical protein; Identified by similarity to GP:14250952; match to protein family HMM PF00535. (321 aa)    
Predicted Functional Partners:
DVU_0117
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
  
 0.788
DVU_0076
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
     0.774
DVU_2993
Glycosyl transferase, group 1/2 family protein; Identified by match to protein family HMM PF00534; match to protein family HMM PF00535.
 
  
 0.773
DVU_2994
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
     0.772
DVU_0134
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
     0.767
DVU_2354
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
  
 0.626
DVU_0327
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397.
 
  
 0.543
DVU_0281
Exopolysaccharide biosynthesis protein, putative; Identified by match to protein family HMM PF02397.
 
  
 0.511
galE
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.445
DVU_0549
High-affinity branched-chain amino acid ABC transporter, permease protein; Identified by similarity to SP:P21628; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
       0.443
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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