Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0601 | DVU_1553 | DVU_0601 | DVU_1553 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | AMP-binding protein. | 0.435 |
| DVU_0601 | DVU_3253 | DVU_0601 | DVU_3253 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP:P76085. | 0.413 |
| DVU_0601 | birA | DVU_0601 | DVU_2557 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.473 |
| DVU_0601 | paaK-1 | DVU_0601 | DVU_0489 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.664 |
| DVU_0601 | paaK-2 | DVU_0601 | DVU_1615 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.635 |
| DVU_0601 | paaK-3 | DVU_0601 | DVU_2735 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.632 |
| DVU_0601 | plsX | DVU_0601 | DVU_1208 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.573 |
| DVU_0601 | purA | DVU_0601 | DVU_3204 | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.511 |
| DVU_1553 | DVU_0601 | DVU_1553 | DVU_0601 | AMP-binding protein. | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.435 |
| DVU_3253 | DVU_0601 | DVU_3253 | DVU_0601 | Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP:P76085. | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.413 |
| DVU_3253 | paaK-2 | DVU_3253 | DVU_1615 | Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP:P76085. | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.417 |
| birA | DVU_0601 | DVU_2557 | DVU_0601 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.473 |
| paaK-1 | DVU_0601 | DVU_0489 | DVU_0601 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.664 |
| paaK-2 | DVU_0601 | DVU_1615 | DVU_0601 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.635 |
| paaK-2 | DVU_3253 | DVU_1615 | DVU_3253 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP:P76085. | 0.417 |
| paaK-3 | DVU_0601 | DVU_2735 | DVU_0601 | Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.632 |
| plsX | DVU_0601 | DVU_1208 | DVU_0601 | Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.573 |
| purA | DVU_0601 | DVU_3204 | DVU_0601 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369. | 0.511 |