Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0631 | DVU_0632 | DVU_0631 | DVU_0632 | Conserved hypothetical protein; Identified by similarity to GP:14041200. | Identified by match to protein family HMM PF00190. | 0.429 |
| DVU_0631 | DVU_0633 | DVU_0631 | DVU_0633 | Conserved hypothetical protein; Identified by similarity to GP:14041200. | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | 0.424 |
| DVU_0631 | DVU_0634 | DVU_0631 | DVU_0634 | Conserved hypothetical protein; Identified by similarity to GP:14041200. | Hypothetical protein; Identified by Glimmer2; putative. | 0.422 |
| DVU_0631 | DVU_0635 | DVU_0631 | DVU_0635 | Conserved hypothetical protein; Identified by similarity to GP:14041200. | Identified by match to protein family HMM PF02366. | 0.411 |
| DVU_0632 | DVU_0631 | DVU_0632 | DVU_0631 | Identified by match to protein family HMM PF00190. | Conserved hypothetical protein; Identified by similarity to GP:14041200. | 0.429 |
| DVU_0632 | DVU_0633 | DVU_0632 | DVU_0633 | Identified by match to protein family HMM PF00190. | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | 0.800 |
| DVU_0632 | DVU_0634 | DVU_0632 | DVU_0634 | Identified by match to protein family HMM PF00190. | Hypothetical protein; Identified by Glimmer2; putative. | 0.773 |
| DVU_0632 | DVU_0635 | DVU_0632 | DVU_0635 | Identified by match to protein family HMM PF00190. | Identified by match to protein family HMM PF02366. | 0.777 |
| DVU_0633 | DVU_0631 | DVU_0633 | DVU_0631 | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | Conserved hypothetical protein; Identified by similarity to GP:14041200. | 0.424 |
| DVU_0633 | DVU_0632 | DVU_0633 | DVU_0632 | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | Identified by match to protein family HMM PF00190. | 0.800 |
| DVU_0633 | DVU_0634 | DVU_0633 | DVU_0634 | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | Hypothetical protein; Identified by Glimmer2; putative. | 0.798 |
| DVU_0633 | DVU_0635 | DVU_0633 | DVU_0635 | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | Identified by match to protein family HMM PF02366. | 0.757 |
| DVU_0634 | DVU_0631 | DVU_0634 | DVU_0631 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GP:14041200. | 0.422 |
| DVU_0634 | DVU_0632 | DVU_0634 | DVU_0632 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00190. | 0.773 |
| DVU_0634 | DVU_0633 | DVU_0634 | DVU_0633 | Hypothetical protein; Identified by Glimmer2; putative. | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | 0.798 |
| DVU_0634 | DVU_0635 | DVU_0634 | DVU_0635 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF02366. | 0.768 |
| DVU_0634 | flgD | DVU_0634 | DVU_1444 | Hypothetical protein; Identified by Glimmer2; putative. | Basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.576 |
| DVU_0635 | DVU_0631 | DVU_0635 | DVU_0631 | Identified by match to protein family HMM PF02366. | Conserved hypothetical protein; Identified by similarity to GP:14041200. | 0.411 |
| DVU_0635 | DVU_0632 | DVU_0635 | DVU_0632 | Identified by match to protein family HMM PF02366. | Identified by match to protein family HMM PF00190. | 0.777 |
| DVU_0635 | DVU_0633 | DVU_0635 | DVU_0633 | Identified by match to protein family HMM PF02366. | Penicillin-binding protein; Identified by similarity to GP:1914832; match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074. | 0.757 |
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