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DVU_0643 DVU_0643 thiS thiS DVU_2092 DVU_2092 DVU_1180 DVU_1180 thiG thiG DVU_0664 DVU_0664 DVU_0136 DVU_0136 DVU_2212 DVU_2212 DVU_0951 DVU_0951 moeA moeA thiC thiC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0643thiF protein, putative; Identified by similarity to SP:P30138; match to protein family HMM PF00899. (230 aa)    
Predicted Functional Partners:
thiS
Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.
  
 0.990
DVU_2092
Identified by match to protein family HMM PF00899.
  
 
 
0.927
DVU_1180
Hypothetical protein; Identified by Glimmer2; putative.
 
 
 0.921
thiG
thiG protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S; Belongs to the ThiG family.
 
  
 0.890
DVU_0664
Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
   
 0.827
DVU_0136
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.824
DVU_2212
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MT00146.
  
 0.817
DVU_0951
Molybdopterin biosynthesis MoeA protein, putative; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.729
moeA
Molybdopterin biosynthesis MoeA protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.717
thiC
Thiamine biosynthesis protein ThiC; Identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190.
  
  
 0.710
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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