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DVU_0647 DVU_0647 DVU_0649 DVU_0649 DVU_0648 DVU_0648 DVU_0103 DVU_0103 DVU_1764 DVU_1764 cobI cobI cbiKp cbiKp DVU_0651 DVU_0651 DVU_2383 DVU_2383 DVU_3072 DVU_3072 DVU_0691 DVU_0691
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0647Iron compound ABC transporter, periplasmic iron compount-binding protein, putative; Identified by similarity to OMNI:DRB0007; match to protein family HMM PF01497. (304 aa)    
Predicted Functional Partners:
DVU_0649
Iron compound ABC transporter, permease protein; Identified by similarity to PIR:S54438; match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.999
DVU_0648
Iron compound ABC transporter, ATP-binding protein; Identified by similarity to SP:P07821; match to protein family HMM PF00005.
 
 
 0.996
DVU_0103
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:NTL02SC0434; match to protein family HMM PF00005.
 
 
 0.944
DVU_1764
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01TT1482.
  
 
 0.936
cobI
Precorrin-2 C20-methyltransferase; Identified by similarity to SP:Q05593; match to protein family HMM PF00590; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family.
  
  
 0.825
cbiKp
Chelatase, putative; Catalyzes the insertion of Co(2+) into sirohydrochlorin. To a lesser extent, is also able to insert Fe(2+) into sirohydrochlorin, yielding siroheme. Its periplasmic location means that it cannot participate in cobalamin biosynthesis and its genomic environment suggests it is likely to be associated with a heme or metal transport system.
  
  
 0.792
DVU_0651
Membrane protein, putative.
    0.625
DVU_2383
tonB dependent receptor domain protein; Identified by match to protein family HMM PF00593.
  
  
 0.623
DVU_3072
ABC transporter, permease protein, putative; Identified by similarity to SP:P76224; match to protein family HMM PF00528.
   
  
 0.605
DVU_0691
Membrane protein, putative.
 
    0.572
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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