node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0661 | DVU_2339 | DVU_0661 | DVU_2339 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Ribosomal protein L11 methyltransferase, putative. | 0.620 |
DVU_0661 | PanF | DVU_0661 | DVU_0088 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Sodium/pantothenate symporter; Identified by similarity to SP:P16256; match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02119; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.664 |
DVU_0661 | guaA | DVU_0661 | DVU_1043 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.567 |
DVU_0661 | panC | DVU_0661 | DVU_2448 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.626 |
DVU_0661 | rimM | DVU_0661 | DVU_0837 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.596 |
DVU_0661 | rnpA | DVU_0661 | DVU_1075 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.638 |
DVU_0661 | rplU | DVU_0661 | DVU_0927 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.555 |
DVU_0661 | rpsP | DVU_0661 | DVU_0839 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.606 |
DVU_0661 | trmD | DVU_0661 | DVU_0836 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. | 0.665 |
DVU_0661 | truA | DVU_0661 | DVU_0911 | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.563 |
DVU_2339 | DVU_0661 | DVU_2339 | DVU_0661 | Ribosomal protein L11 methyltransferase, putative. | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.620 |
DVU_2339 | PanF | DVU_2339 | DVU_0088 | Ribosomal protein L11 methyltransferase, putative. | Sodium/pantothenate symporter; Identified by similarity to SP:P16256; match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02119; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.707 |
PanF | DVU_0661 | DVU_0088 | DVU_0661 | Sodium/pantothenate symporter; Identified by similarity to SP:P16256; match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02119; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.664 |
PanF | DVU_2339 | DVU_0088 | DVU_2339 | Sodium/pantothenate symporter; Identified by similarity to SP:P16256; match to protein family HMM PF00474; match to protein family HMM TIGR00813; match to protein family HMM TIGR02119; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Ribosomal protein L11 methyltransferase, putative. | 0.707 |
guaA | DVU_0661 | DVU_1043 | DVU_0661 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.567 |
guaA | panC | DVU_1043 | DVU_2448 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.633 |
guaA | rimM | DVU_1043 | DVU_0837 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family. | 0.923 |
guaA | rpsP | DVU_1043 | DVU_0839 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. | 0.412 |
guaA | trmD | DVU_1043 | DVU_0836 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. | 0.784 |
panC | DVU_0661 | DVU_2448 | DVU_0661 | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | Dihydrouridine synthase family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.626 |