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DVU_0686 DVU_0686 DVU_0687 DVU_0687 DVU_0173 DVU_0173 qrcB qrcB DVU_1611 DVU_1611 rnhA rnhA DVU_0688 DVU_0688 DVU_1286 DVU_1286 cooF cooF fdnG-3 fdnG-3 fdnG-2 fdnG-2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_0686Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037. (162 aa)    
Predicted Functional Partners:
DVU_0687
Aldehyde:ferredoxin oxidoreductase, tungsten-containing, putative; Identified by similarity to SP:Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730.
 
 
 0.987
DVU_0173
Thiosulfate reductase, putative; Identified by similarity to SP:P37600; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879.
 
 
 0.804
qrcB
Molybdopterin oxidoreductase, molybdopterin-binding subunit, putative; Component of the respiratory Qrc complex, that catalyzes the reduction of the menaquinone pool using electrons transferred from the reduced periplasmic cytochrome c3, and which is probably involved in sulfate respiration. Is likely essential for growth on H(2) or formate since the periplasmic hydrogenases and/or formate dehydrogenases act as primary electron donors for the Qrc complex. The function of the QrcB subunit is unknown; in the absence of a catalytic site, it may provide a structural scaffold for the other [...]
 
 
 0.788
DVU_1611
Molybdopterin oxidoreductase domain protein; Identified by match to protein family HMM PF00384; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.787
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
   0.786
DVU_0688
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.782
DVU_1286
Reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF03916.
 
 
 0.768
cooF
Iron-sulfur protein CooF; Identified by similarity to SP:P31894; match to protein family HMM PF00037.
 
   
 0.746
fdnG-3
Formate dehydrogenase, alpha subunit, selenocysteine-containing; Alpha chain of the formate dehydrogenase (FDH) that catalyzes the reversible two-electron oxidation of formate to carbon dioxide. The alpha subunit of formate dehydrogenase forms the active site.
  
 
 0.737
fdnG-2
Formate dehydrogenase, alpha subunit, selenocysteine-containing; Selenoprotein; identified by similarity to SP:P24183; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR01553; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.735
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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