STRINGSTRING
DVU_0752 DVU_0752 DVU_0753 DVU_0753 DVU_2341 DVU_2341 DVU_0751 DVU_0751 DVU_2340 DVU_2340 glnP glnP DVU_0967 DVU_0967 DVU_0674 DVU_0674 DVU_0676 DVU_0676 DVU_1237 DVU_1237 DVU_2343 DVU_2343
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0752Amino acid ABC transporter, amino acid-binding protein; Identified by match to protein family HMM PF00497. (275 aa)    
Predicted Functional Partners:
DVU_0753
Amino acid ABC transporter, ATP-binding protein; Identified by similarity to SP:P27675; match to protein family HMM PF00005.
 0.988
DVU_2341
Amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.946
DVU_0751
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by similarity to OMNI:NTL03PA02202; similar to OMNI:NTL03PA04194; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.930
DVU_2340
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.856
glnP
Glutamine ABC transporter, permease protein; Identified by similarity to SP:P10345; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.819
DVU_0967
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; Belongs to the binding-protein-dependent transport system permease family.
 
 0.812
DVU_0674
ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.809
DVU_0676
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.800
DVU_1237
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.793
DVU_2343
Amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.780
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.