Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0760 | DVU_0761 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.485 |
DVU_0760 | DVU_0762 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | 0.443 |
DVU_0761 | DVU_0760 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.485 |
DVU_0761 | DVU_0762 | Lipoprotein, putative. | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | 0.700 |
DVU_0761 | DVU_0763 | Lipoprotein, putative. | GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.497 |
DVU_0762 | DVU_0760 | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | Hypothetical protein; Identified by Glimmer2; putative. | 0.443 |
DVU_0762 | DVU_0761 | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | Lipoprotein, putative. | 0.700 |
DVU_0762 | DVU_0763 | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.553 |
DVU_0762 | DVU_0790 | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | 0.449 |
DVU_0762 | DVU_2849 | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | Tail fiber protein, putative. | 0.412 |
DVU_0763 | DVU_0761 | GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | Lipoprotein, putative. | 0.497 |
DVU_0763 | DVU_0762 | GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | 0.553 |
DVU_0790 | DVU_0762 | Radical SAM protein, TIGR01212 family; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212. | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | 0.449 |
DVU_2849 | DVU_0762 | Tail fiber protein, putative. | Conserved hypothetical protein; Identified by similarity to SP:Q8XBS4. | 0.412 |