Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_0793 | fabI | DVU_0793 | DVU_0794 | Hypothetical protein; Identified by Glimmer2; putative. | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | 0.783 |
DVU_0793 | hisD | DVU_0793 | DVU_0796 | Hypothetical protein; Identified by Glimmer2; putative. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.496 |
DVU_0793 | purC | DVU_0793 | DVU_0795 | Hypothetical protein; Identified by Glimmer2; putative. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | 0.511 |
fabI | DVU_0793 | DVU_0794 | DVU_0793 | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | Hypothetical protein; Identified by Glimmer2; putative. | 0.783 |
fabI | hisD | DVU_0794 | DVU_0796 | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.586 |
fabI | purC | DVU_0794 | DVU_0795 | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | 0.572 |
hisD | DVU_0793 | DVU_0796 | DVU_0793 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Hypothetical protein; Identified by Glimmer2; putative. | 0.496 |
hisD | fabI | DVU_0796 | DVU_0794 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | 0.586 |
hisD | purC | DVU_0796 | DVU_0795 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | 0.940 |
purC | DVU_0793 | DVU_0795 | DVU_0793 | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.511 |
purC | fabI | DVU_0795 | DVU_0794 | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P29132; match to protein family HMM PF00106. | 0.572 |
purC | hisD | DVU_0795 | DVU_0796 | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:Q59566; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.940 |