Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_0817 | DVU_0818 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein; Identified by similarity to GP:27359550. | 0.492 |
DVU_0817 | DVU_2215 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00076. | 0.570 |
DVU_0817 | DVU_2569 | Hypothetical protein; Identified by Glimmer2; putative. | Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to SP:O52980; match to protein family HMM PF00254. | 0.557 |
DVU_0818 | DVU_0817 | Conserved domain protein; Identified by similarity to GP:27359550. | Hypothetical protein; Identified by Glimmer2; putative. | 0.492 |
DVU_2215 | DVU_0817 | Identified by match to protein family HMM PF00076. | Hypothetical protein; Identified by Glimmer2; putative. | 0.570 |
DVU_2215 | DVU_2569 | Identified by match to protein family HMM PF00076. | Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to SP:O52980; match to protein family HMM PF00254. | 0.653 |
DVU_2569 | DVU_0817 | Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to SP:O52980; match to protein family HMM PF00254. | Hypothetical protein; Identified by Glimmer2; putative. | 0.557 |
DVU_2569 | DVU_2215 | Peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to SP:O52980; match to protein family HMM PF00254. | Identified by match to protein family HMM PF00076. | 0.653 |