DVU_0854 protein (Desulfovibrio vulgaris Hildenborough)

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Score

DVU_0854

NirD protein, putative; Identified by similarity to SP:Q52522. (176 aa)

Predicted Functional Partners:

DVU_0855

0.996

DVU_3167

0.981

DVU_0857

0.964

hemB

0.659

putA

0.544

DVU_0734

0.540

DVU_2012

0.503

DVU_3004

0.491

DVU_1000

0.482

DVU_0182

0.465

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0182	DVU_0854	DVU_0182	DVU_0854	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	NirD protein, putative; Identified by similarity to SP:Q52522.	0.465
DVU_0182	DVU_2012	DVU_0182	DVU_2012	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Hypothetical protein; Identified by Glimmer2; putative.	0.458
DVU_0182	DVU_3004	DVU_0182	DVU_3004	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.417
DVU_0182	DVU_3167	DVU_0182	DVU_3167	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.465
DVU_0734	DVU_0854	DVU_0734	DVU_0854	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	NirD protein, putative; Identified by similarity to SP:Q52522.	0.540
DVU_0734	DVU_0855	DVU_0734	DVU_0855	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.521
DVU_0734	DVU_0857	DVU_0734	DVU_0857	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.630
DVU_0734	DVU_3004	DVU_0734	DVU_3004	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.434
DVU_0734	DVU_3167	DVU_0734	DVU_3167	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.541
DVU_0734	hemB	DVU_0734	DVU_0856	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	Porphobilinogen synthase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.	0.994
DVU_0854	DVU_0182	DVU_0854	DVU_0182	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.465
DVU_0854	DVU_0734	DVU_0854	DVU_0734	NirD protein, putative; Identified by similarity to SP:Q52522.	Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.	0.540
DVU_0854	DVU_0855	DVU_0854	DVU_0855	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.996
DVU_0854	DVU_0857	DVU_0854	DVU_0857	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.964
DVU_0854	DVU_1000	DVU_0854	DVU_1000	NirD protein, putative; Identified by similarity to SP:Q52522.	Peptidase, M24 family; Identified by match to protein family HMM PF00557.	0.482
DVU_0854	DVU_2012	DVU_0854	DVU_2012	NirD protein, putative; Identified by similarity to SP:Q52522.	Hypothetical protein; Identified by Glimmer2; putative.	0.503
DVU_0854	DVU_3004	DVU_0854	DVU_3004	NirD protein, putative; Identified by similarity to SP:Q52522.	Radical SAM domain protein; Identified by match to protein family HMM PF04055.	0.491
DVU_0854	DVU_3167	DVU_0854	DVU_3167	NirD protein, putative; Identified by similarity to SP:Q52522.	Heme biosynthesis protein, putative; Identified by similarity to SP:Q52522.	0.981
DVU_0854	hemB	DVU_0854	DVU_0856	NirD protein, putative; Identified by similarity to SP:Q52522.	Porphobilinogen synthase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family.	0.659
DVU_0854	putA	DVU_0854	DVU_3319	NirD protein, putative; Identified by similarity to SP:Q52522.	Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.	0.544

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