DVU_0940 protein (Desulfovibrio vulgaris Hildenborough)

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second shell of interactors

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Predicted Interactions

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Score

DVU_0940

GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. (243 aa)

Predicted Functional Partners:

DVU_3123

0.942

DVU_1181

0.931

DVU_0666

0.930

DVU_0457

0.927

DVU_0722

0.911

DVU_0111

0.910

DVU_0491

0.906

phoB

0.902

DVU_0129

0.894

DVU_2933

0.891

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0111	DVU_0457	DVU_0111	DVU_0457	Response regulator; Identified by match to protein family HMM PF00072.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.449
DVU_0111	DVU_0722	DVU_0111	DVU_0722	Response regulator; Identified by match to protein family HMM PF00072.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	0.413
DVU_0111	DVU_0940	DVU_0111	DVU_0940	Response regulator; Identified by match to protein family HMM PF00072.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.910
DVU_0111	DVU_1181	DVU_0111	DVU_1181	Response regulator; Identified by match to protein family HMM PF00072.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966; match to protein family HMM TIGR00277.	0.445
DVU_0111	DVU_2933	DVU_0111	DVU_2933	Response regulator; Identified by match to protein family HMM PF00072.	Response regulator/sensory box/HDIG domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	0.584
DVU_0111	phoB	DVU_0111	DVU_1083	Response regulator; Identified by match to protein family HMM PF00072.	Phosphate regulon transcriptional regulator PhoB; Identified by similarity to SP:P23620; match to protein family HMM PF00072; match to protein family HMM PF00486.	0.483
DVU_0129	DVU_0457	DVU_0129	DVU_0457	Sensory box/HDIG domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	EAL domain protein; Identified by match to protein family HMM PF00563.	0.412
DVU_0129	DVU_0722	DVU_0129	DVU_0722	Sensory box/HDIG domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	0.425
DVU_0129	DVU_0940	DVU_0129	DVU_0940	Sensory box/HDIG domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.894
DVU_0457	DVU_0111	DVU_0457	DVU_0111	EAL domain protein; Identified by match to protein family HMM PF00563.	Response regulator; Identified by match to protein family HMM PF00072.	0.449
DVU_0457	DVU_0129	DVU_0457	DVU_0129	EAL domain protein; Identified by match to protein family HMM PF00563.	Sensory box/HDIG domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	0.412
DVU_0457	DVU_0940	DVU_0457	DVU_0940	EAL domain protein; Identified by match to protein family HMM PF00563.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.927
DVU_0457	DVU_2933	DVU_0457	DVU_2933	EAL domain protein; Identified by match to protein family HMM PF00563.	Response regulator/sensory box/HDIG domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	0.484
DVU_0491	DVU_0940	DVU_0491	DVU_0940	HDIG domain protein; Identified by similarity to OMNI:NTL01RS2515; match to protein family HMM PF01966; match to protein family HMM TIGR00277.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.906
DVU_0666	DVU_0940	DVU_0666	DVU_0940	HD domain protein; Identified by match to protein family HMM PF01966.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.930
DVU_0722	DVU_0111	DVU_0722	DVU_0111	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	Response regulator; Identified by match to protein family HMM PF00072.	0.413
DVU_0722	DVU_0129	DVU_0722	DVU_0129	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	Sensory box/HDIG domain protein; Identified by match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	0.425
DVU_0722	DVU_0940	DVU_0722	DVU_0940	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.911
DVU_0722	DVU_1181	DVU_0722	DVU_1181	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966; match to protein family HMM TIGR00277.	0.452
DVU_0722	DVU_2933	DVU_0722	DVU_2933	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01966.	Response regulator/sensory box/HDIG domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01966; match to protein family HMM TIGR00229; match to protein family HMM TIGR00277.	0.496

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