STRINGSTRING
DVU_0948 DVU_0948 DVU_2769 DVU_2769 DVU_1072 DVU_1072 DVU_0949 DVU_0949 DVU_2798 DVU_2798 DVU_0950 DVU_0950 DVU_0947 DVU_0947 DVU_0952 DVU_0952 DVU_0951 DVU_0951
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_0948Conserved hypothetical protein. (142 aa)    
Predicted Functional Partners:
DVU_2769
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01FN1523.
  
 
  0.908
DVU_1072
Conserved hypothetical protein; Identified by similarity to OMNI:BR1366.
  
 
  0.907
DVU_0949
Conserved domain protein; Identified by similarity to OMNI:NMB1475.
  
    0.688
DVU_2798
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
    0.469
DVU_0950
Hypothetical protein; Identified by Glimmer2; putative.
       0.468
DVU_0947
Membrane protein, putative; Identified by match to protein family HMM PF00892.
  
    0.463
DVU_0952
Conserved hypothetical protein TIGR00282; Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00282.
  
    0.424
DVU_0951
Molybdopterin biosynthesis MoeA protein, putative; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.418
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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