Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_0079 | DVU_0099 | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.601 |
| DVU_0079 | DVU_0100 | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | 0.553 |
| DVU_0079 | DVU_0102 | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | 0.632 |
| DVU_0079 | DVU_0525 | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.594 |
| DVU_0079 | DVU_0949 | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | Conserved domain protein; Identified by similarity to OMNI:NMB1475. | 0.586 |
| DVU_0099 | DVU_0079 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | 0.601 |
| DVU_0099 | DVU_0100 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | 0.940 |
| DVU_0099 | DVU_0102 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | 0.704 |
| DVU_0099 | DVU_0525 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.588 |
| DVU_0099 | DVU_0949 | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Conserved domain protein; Identified by similarity to OMNI:NMB1475. | 0.616 |
| DVU_0100 | DVU_0079 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | 0.553 |
| DVU_0100 | DVU_0099 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.940 |
| DVU_0100 | DVU_0102 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | 0.822 |
| DVU_0100 | DVU_0525 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.559 |
| DVU_0100 | DVU_0949 | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | Conserved domain protein; Identified by similarity to OMNI:NMB1475. | 0.593 |
| DVU_0102 | DVU_0079 | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | ZIP zinc transporter family protein; Identified by similarity to SP:Q06916; match to protein family HMM PF02535. | 0.632 |
| DVU_0102 | DVU_0099 | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | TonB domain protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.704 |
| DVU_0102 | DVU_0100 | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | TonB-dependent receptor; Identified by match to protein family HMM PF00593. | 0.822 |
| DVU_0102 | DVU_0525 | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. | 0.615 |
| DVU_0102 | DVU_0949 | Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297. | Conserved domain protein; Identified by similarity to OMNI:NMB1475. | 0.665 |
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