STRINGSTRING
DVU_0983 DVU_0983 DVU_0982 DVU_0982 miaB miaB lon lon eno eno DVU_0985 DVU_0985 DVU_3004 DVU_3004 DVU_0318 DVU_0318
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_0983Conserved hypothetical protein; Identified by similarity to SP:Q50604; match to protein family HMM PF02577. (181 aa)    
Predicted Functional Partners:
DVU_0982
PHP domain protein; Identified by match to protein family HMM PF02231; match to protein family HMM PF02811.
  
    0.808
miaB
tRNA-i(6)A37 modification enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
    0.803
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
   
   0.676
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.
    
   0.663
DVU_0985
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.577
DVU_3004
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
   
   0.446
DVU_0318
TPR domain protein; Identified by match to protein family HMM PF00515.
    
   0.438
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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