STRINGSTRING
DVU_0991 DVU_0991 nth nth pspC pspC DVU_0988 DVU_0988 DVU_0989 DVU_0989 cheV-3 cheV-3 DVU_0493 DVU_0493
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_0991Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MM1967. (272 aa)    
Predicted Functional Partners:
nth
Endonuclease III, putative; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.776
pspC
Phage shock protein C; Identified by similarity to SP:P23855; match to protein family HMM PF04024.
  
     0.593
DVU_0988
Carbohydrate kinase, PfkB family; Identified by match to protein family HMM PF00294.
  
    0.541
DVU_0989
Periplasmic divalent cation tolerance protein cutA, putative; Identified by similarity to SP:P36654; match to protein family HMM PF03091.
       0.539
cheV-3
Chemotaxis protein CheV; Identified by similarity to SP:P37599; match to protein family HMM PF00072; match to protein family HMM PF01584.
  
    0.454
DVU_0493
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.437
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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