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DVU_1030 DVU_1030 DVU_0542 DVU_0542 DVU_0006 DVU_0006 DVU_1031 DVU_1031 yfiA yfiA hisC hisC DVU_0791 DVU_0791 cmk cmk engB engB DVU_1032 DVU_1032 DVU_0261 DVU_0261
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1030Identified by match to protein family HMM PF00582. (147 aa)    
Predicted Functional Partners:
DVU_0542
Universal stress protein family; Identified by similarity to OMNI:NTL02MA3200; match to protein family HMM PF00582.
  
  
 0.782
DVU_0006
Identified by match to protein family HMM PF00582.
  
  
 0.656
DVU_1031
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
yfiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.481
hisC
Histidinol-phosphate aminotransferase; Identified by similarity to SP:P17731; match to protein family HMM PF00155; match to protein family HMM TIGR01141.
  
    0.473
DVU_0791
methylated-DNA--protein-cysteine methyltransferase, DNA-binding domain protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589.
  
    0.471
cmk
Cytidylate kinase; Identified by similarity to SP:P23863; match to protein family HMM PF02224; match to protein family HMM TIGR00017.
       0.464
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
 
 0.464
DVU_1032
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.458
DVU_0261
Identified by match to protein family HMM PF00582.
  
    0.435
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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