Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DVU_1125 | DVU_1126 | Conserved domain protein; Identified by similarity to GP:5531665. | Lipoprotein, putative. | 0.781 |
DVU_1125 | DVU_1127 | Conserved domain protein; Identified by similarity to GP:5531665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.813 |
DVU_1125 | DVU_1128 | Conserved domain protein; Identified by similarity to GP:5531665. | Lysozyme, putative; Identified by match to protein family HMM PF01464. | 0.795 |
DVU_1125 | DVU_1129 | Conserved domain protein; Identified by similarity to GP:5531665. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03ST1409. | 0.813 |
DVU_1125 | DVU_1130 | Conserved domain protein; Identified by similarity to GP:5531665. | DNA-binding protein. | 0.618 |
DVU_1125 | DVU_1131 | Conserved domain protein; Identified by similarity to GP:5531665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.683 |
DVU_1125 | DVU_1132 | Conserved domain protein; Identified by similarity to GP:5531665. | Conserved hypothetical protein; Identified by similarity to OMNI:NMB0985. | 0.706 |
DVU_1125 | DVU_1133 | Conserved domain protein; Identified by similarity to GP:5531665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.643 |
DVU_1125 | DVU_1135 | Conserved domain protein; Identified by similarity to GP:5531665. | Conserved domain protein; Identified by similarity to GP:14277814. | 0.445 |
DVU_1125 | DVU_1137 | Conserved domain protein; Identified by similarity to GP:5531665. | Hypothetical protein; Identified by Glimmer2; putative. | 0.442 |
DVU_1126 | DVU_1125 | Lipoprotein, putative. | Conserved domain protein; Identified by similarity to GP:5531665. | 0.781 |
DVU_1126 | DVU_1127 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.781 |
DVU_1126 | DVU_1128 | Lipoprotein, putative. | Lysozyme, putative; Identified by match to protein family HMM PF01464. | 0.784 |
DVU_1126 | DVU_1129 | Lipoprotein, putative. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL03ST1409. | 0.786 |
DVU_1126 | DVU_1130 | Lipoprotein, putative. | DNA-binding protein. | 0.580 |
DVU_1126 | DVU_1131 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.586 |
DVU_1126 | DVU_1132 | Lipoprotein, putative. | Conserved hypothetical protein; Identified by similarity to OMNI:NMB0985. | 0.583 |
DVU_1126 | DVU_1133 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.590 |
DVU_1126 | DVU_1135 | Lipoprotein, putative. | Conserved domain protein; Identified by similarity to GP:14277814. | 0.423 |
DVU_1126 | DVU_1137 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.406 |
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