Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1156 | DVU_1157 | DVU_1156 | DVU_1157 | Sigma-54 dependent transcriptional regulator, putative/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199. | Sensory box histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229. | 0.843 |
| DVU_1156 | DVU_1158 | DVU_1156 | DVU_1158 | Sigma-54 dependent transcriptional regulator, putative/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199. | Hypothetical protein; Identified by Glimmer2; putative. | 0.493 |
| DVU_1157 | DVU_1156 | DVU_1157 | DVU_1156 | Sensory box histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229. | Sigma-54 dependent transcriptional regulator, putative/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199. | 0.843 |
| DVU_1157 | DVU_1158 | DVU_1157 | DVU_1158 | Sensory box histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229. | Hypothetical protein; Identified by Glimmer2; putative. | 0.464 |
| DVU_1158 | DVU_1156 | DVU_1158 | DVU_1156 | Hypothetical protein; Identified by Glimmer2; putative. | Sigma-54 dependent transcriptional regulator, putative/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM TIGR01199. | 0.493 |
| DVU_1158 | DVU_1157 | DVU_1158 | DVU_1157 | Hypothetical protein; Identified by Glimmer2; putative. | Sensory box histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM TIGR00229. | 0.464 |
| DVU_1158 | DVU_3074 | DVU_1158 | DVU_3074 | Hypothetical protein; Identified by Glimmer2; putative. | Membrane protein, putative; Identified by similarity to OMNI:VC0081; match to protein family HMM PF00892. | 0.480 |
| DVU_1158 | sucCD | DVU_1158 | DVU_2137 | Hypothetical protein; Identified by Glimmer2; putative. | succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.647 |
| DVU_3074 | DVU_1158 | DVU_3074 | DVU_1158 | Membrane protein, putative; Identified by similarity to OMNI:VC0081; match to protein family HMM PF00892. | Hypothetical protein; Identified by Glimmer2; putative. | 0.480 |
| DVU_3074 | sucCD | DVU_3074 | DVU_2137 | Membrane protein, putative; Identified by similarity to OMNI:VC0081; match to protein family HMM PF00892. | succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.525 |
| sucCD | DVU_1158 | DVU_2137 | DVU_1158 | succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Hypothetical protein; Identified by Glimmer2; putative. | 0.647 |
| sucCD | DVU_3074 | DVU_2137 | DVU_3074 | succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | Membrane protein, putative; Identified by similarity to OMNI:VC0081; match to protein family HMM PF00892. | 0.525 |