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DVU_1163 DVU_1163 amiE amiE DVU_1290 DVU_1290 DVU_1500 DVU_1500 DVU_0734 DVU_0734 DVU_0532 DVU_0532 DVU_0265 DVU_0265 DVU_1162 DVU_1162 DVU_1161 DVU_1161 sucCD sucCD DVU_1160 DVU_1160
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_1163Major facilitator superfamily protein; Identified by match to protein family HMM PF00083. (424 aa)    
Predicted Functional Partners:
amiE
Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
 
  
 0.694
DVU_1290
Nitrate reductase, gamma subunit, putative; Identified by match to protein family HMM PF02665.
  
  
 0.658
DVU_1500
Major capsid protein, HK97 family; Identified by match to protein family HMM TIGR01554.
   
    0.617
DVU_0734
Uroporphyrinogen III synthase/methyltransferase; Identified by similarity to GP:12655814; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01369; match to protein family HMM TIGR01469.
  
  
 0.606
DVU_0532
Hmc operon protein 5; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates.
  
  
 0.554
DVU_0265
Membrane protein, putative.
  
  
 0.534
DVU_1162
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.524
DVU_1161
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.504
sucCD
succinyl-CoA synthase, beta/alpha subunits; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
  
 0.483
DVU_1160
Urea transporter, putative; Urea channel that facilitates transmembrane urea transport down a concentration gradient; Belongs to the urea transporter family.
  
  
 0.471
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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