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tpX tpX sodB sodB DVU_1229 DVU_1229 DVU_2247 DVU_2247 fliN fliN DVU_1933 DVU_1933 DVU_1784 DVU_1784 DVU_1230 DVU_1230 amt amt DVU_2690 DVU_2690 cysK cysK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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tpXThiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (172 aa)    
Predicted Functional Partners:
sodB
Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.864
DVU_1229
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
DVU_2247
Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578.
  
  
 0.695
fliN
Flagellar motor switch protein FliN; Identified by similarity to SP:P15070; match to protein family HMM PF01052.
   
   0.618
DVU_1933
Peptidase, PfpI family; Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382.
 
 
 0.612
DVU_1784
Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
    0.588
DVU_1230
Hypothetical protein; Identified by Glimmer2; putative.
       0.564
amt
Ammonium transporter; Identified by similarity to SP:Q07429; match to protein family HMM PF00909; match to protein family HMM TIGR00836.
       0.564
DVU_2690
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.562
cysK
Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
  
 0.536
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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