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DVU_1292 DVU_1292 DVU_1293 DVU_1293 DVU_1291 DVU_1291 DVU_1290 DVU_1290 DVU_1287 DVU_1287 DVU_1289 DVU_1289 DVU_1288 DVU_1288 DVU_1286 DVU_1286
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1292Hypothetical protein; Identified by Glimmer2; putative. (57 aa)    
Predicted Functional Partners:
DVU_1293
Hypothetical protein; Identified by Glimmer2; putative.
       0.752
DVU_1291
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.659
DVU_1290
Nitrate reductase, gamma subunit, putative; Identified by match to protein family HMM PF02665.
  
    0.523
DVU_1287
Reductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.
  
    0.515
DVU_1289
Reductase, iron-sulfur binding subunit, putative; Identified by match to protein family HMM PF00037.
  
    0.515
DVU_1288
Cytochrome c family protein; Identified by similarity to OMNI:AF0503.
  
    0.514
DVU_1286
Reductase, transmembrane subunit, putative; Identified by match to protein family HMM PF03916.
  
    0.509
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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