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DVU_1341 DVU_1341 DVU_1342 DVU_1342 DVU_1343 DVU_1343 DVU_0102 DVU_0102 DVU_2491 DVU_2491 DVU_1340 DVU_1340 DVU_0103 DVU_0103 DVU_0104 DVU_0104 DVU_0126 DVU_0126 DVU_1339 DVU_1339 ispG ispG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
DVU_1341Cation ABC transporter, permease protein; Identified by similarity to GP:5019735; match to protein family HMM PF00950. (274 aa)    
Predicted Functional Partners:
DVU_1342
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005.
 0.999
DVU_1343
Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297.
 
 
 0.998
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297.
 
 
 0.951
DVU_2491
ABC transporter, ATP-binding protein; Identified by similarity to SP:P31060; match to protein family HMM PF00005.
  
 
 0.919
DVU_1340
Transcriptional regulator, Fur family; Belongs to the Fur family.
 
  
 0.877
DVU_0103
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI:NTL02SC0434; match to protein family HMM PF00005.
   
 0.594
DVU_0104
Cation ABC transporter, permease protein, putative; Identified by similarity to SP:P44661; match to protein family HMM PF00950.
  
  
 
0.522
DVU_0126
ABC transporter, ATP-binding protein; Identified by similarity to SP:P37624; match to protein family HMM PF00005.
    
 0.474
DVU_1339
Lipoprotein, putative.
  
    0.473
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.456
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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