node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_1347 | DVU_1349 | DVU_1347 | DVU_1349 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.742 |
DVU_1347 | dxs | DVU_1347 | DVU_1350 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.627 |
DVU_1347 | ispG | DVU_1347 | DVU_1344 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.607 |
DVU_1347 | proS | DVU_1347 | DVU_1345 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] | 0.603 |
DVU_1347 | xseA | DVU_1347 | DVU_1346 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.718 |
DVU_1347 | xseB | DVU_1347 | DVU_1348 | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.783 |
DVU_1349 | DVU_1347 | DVU_1349 | DVU_1347 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | 0.742 |
DVU_1349 | dxs | DVU_1349 | DVU_1350 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.938 |
DVU_1349 | hemC | DVU_1349 | DVU_1890 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.557 |
DVU_1349 | ispG | DVU_1349 | DVU_1344 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.752 |
DVU_1349 | proS | DVU_1349 | DVU_1345 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] | 0.562 |
DVU_1349 | xseA | DVU_1349 | DVU_1346 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.857 |
DVU_1349 | xseB | DVU_1349 | DVU_1348 | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.882 |
dxs | DVU_1347 | DVU_1350 | DVU_1347 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551. | 0.627 |
dxs | DVU_1349 | DVU_1350 | DVU_1349 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Geranylgeranyl diphosphate synthase; Identified by similarity to GP:5631295; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.938 |
dxs | ispG | DVU_1350 | DVU_1344 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.915 |
dxs | proS | DVU_1350 | DVU_1345 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] | 0.502 |
dxs | xseA | DVU_1350 | DVU_1346 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.591 |
dxs | xseB | DVU_1350 | DVU_1348 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.703 |
fliA | xseB | DVU_3229 | DVU_1348 | RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.616 |