Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_1351 | DVU_1352 | DVU_1351 | DVU_1352 | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | 6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to protein family HMM PF01242. | 0.498 |
DVU_1351 | DVU_1544 | DVU_1351 | DVU_1544 | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | Mechanosensitive ion channel family protein; Identified by similarity to SP:P77338; match to protein family HMM PF00924. | 0.511 |
DVU_1351 | dnaE | DVU_1351 | DVU_1353 | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594. | 0.503 |
DVU_1352 | DVU_1351 | DVU_1352 | DVU_1351 | 6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to protein family HMM PF01242. | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | 0.498 |
DVU_1352 | dnaE | DVU_1352 | DVU_1353 | 6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to protein family HMM PF01242. | DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594. | 0.808 |
DVU_1544 | DVU_1351 | DVU_1544 | DVU_1351 | Mechanosensitive ion channel family protein; Identified by similarity to SP:P77338; match to protein family HMM PF00924. | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | 0.511 |
dnaE | DVU_1351 | DVU_1353 | DVU_1351 | DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594. | Membrane protein, MarC family; Identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427. | 0.503 |
dnaE | DVU_1352 | DVU_1353 | DVU_1352 | DNA polymerase III, alpha subunit; Identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02231; match to protein family HMM PF02811; match to protein family HMM TIGR00594. | 6-pyruvoyl tetrahydrobiopterin synthase, putative; Identified by match to protein family HMM PF01242. | 0.808 |