Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1445 | DVU_1446 | DVU_1445 | DVU_1446 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Identified by match to protein family HMM PF01075. | 0.793 |
| DVU_1445 | DVU_1447 | DVU_1445 | DVU_1447 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | CgeB family protein. | 0.882 |
| DVU_1445 | DVU_1448 | DVU_1445 | DVU_1448 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Conserved hypothetical protein; Identified by similarity to OMNI:TM0735; match to protein family HMM PF03961. | 0.781 |
| DVU_1445 | DVU_1449 | DVU_1445 | DVU_1449 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Anti-anti-sigma factor, putative; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.599 |
| DVU_1445 | DVU_1450 | DVU_1445 | DVU_1450 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Anti-sigma factor, putative; Identified by similarity to SP:P70878; match to protein family HMM PF02518. | 0.696 |
| DVU_1445 | DVU_1451 | DVU_1445 | DVU_1451 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Response regulator; Identified by match to protein family HMM PF00072. | 0.706 |
| DVU_1445 | DVU_3231 | DVU_1445 | DVU_3231 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Flagellar biosynthesis protein FlhF, putative; Identified by similarity to SP:Q01960; match to protein family HMM PF00448. | 0.953 |
| DVU_1445 | dtd | DVU_1445 | DVU_1452 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.487 |
| DVU_1445 | fadD | DVU_1445 | DVU_1453 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | long-chain-fatty-acid--CoA ligase; Identified by similarity to SP:P94547; match to protein family HMM PF00501. | 0.453 |
| DVU_1445 | fliW | DVU_1445 | DVU_0522 | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | Conserved hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. Belongs to the FliW family. | 0.717 |
| DVU_1446 | DVU_1445 | DVU_1446 | DVU_1445 | Identified by match to protein family HMM PF01075. | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | 0.793 |
| DVU_1446 | DVU_1447 | DVU_1446 | DVU_1447 | Identified by match to protein family HMM PF01075. | CgeB family protein. | 0.952 |
| DVU_1446 | DVU_1448 | DVU_1446 | DVU_1448 | Identified by match to protein family HMM PF01075. | Conserved hypothetical protein; Identified by similarity to OMNI:TM0735; match to protein family HMM PF03961. | 0.871 |
| DVU_1446 | DVU_1449 | DVU_1446 | DVU_1449 | Identified by match to protein family HMM PF01075. | Anti-anti-sigma factor, putative; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family. | 0.736 |
| DVU_1446 | DVU_1450 | DVU_1446 | DVU_1450 | Identified by match to protein family HMM PF01075. | Anti-sigma factor, putative; Identified by similarity to SP:P70878; match to protein family HMM PF02518. | 0.734 |
| DVU_1446 | DVU_1451 | DVU_1446 | DVU_1451 | Identified by match to protein family HMM PF01075. | Response regulator; Identified by match to protein family HMM PF00072. | 0.734 |
| DVU_1446 | DVU_3231 | DVU_1446 | DVU_3231 | Identified by match to protein family HMM PF01075. | Flagellar biosynthesis protein FlhF, putative; Identified by similarity to SP:Q01960; match to protein family HMM PF00448. | 0.400 |
| DVU_1446 | dtd | DVU_1446 | DVU_1452 | Identified by match to protein family HMM PF01075. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.745 |
| DVU_1446 | fadD | DVU_1446 | DVU_1453 | Identified by match to protein family HMM PF01075. | long-chain-fatty-acid--CoA ligase; Identified by similarity to SP:P94547; match to protein family HMM PF00501. | 0.718 |
| DVU_1447 | DVU_1445 | DVU_1447 | DVU_1445 | CgeB family protein. | Flagellar hook-length control domain protein; Identified by match to protein family HMM PF02120. | 0.882 |
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