node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_1301 | DVU_1537 | DVU_1301 | DVU_1537 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | 0.741 |
DVU_1301 | rplM | DVU_1301 | DVU_2518 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.763 |
DVU_1301 | rplU | DVU_1301 | DVU_0927 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.781 |
DVU_1301 | rplY | DVU_1301 | DVU_1574 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.809 |
DVU_1301 | rpmJ | DVU_1301 | DVU_1325 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.842 |
DVU_1301 | rpsF | DVU_1301 | DVU_0956 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.436 |
DVU_1301 | rpsT | DVU_1301 | DVU_1896 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.609 |
DVU_1537 | DVU_1301 | DVU_1537 | DVU_1301 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Hypothetical protein; Identified by Glimmer2; putative. | 0.741 |
DVU_1537 | DVU_1826 | DVU_1537 | DVU_1826 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Hypothetical protein; Identified by Glimmer2; putative. | 0.647 |
DVU_1537 | bamA | DVU_1537 | DVU_2373 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.709 |
DVU_1537 | lpxD | DVU_1537 | DVU_2369 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.683 |
DVU_1537 | rplM | DVU_1537 | DVU_2518 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.857 |
DVU_1537 | rplU | DVU_1537 | DVU_0927 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.816 |
DVU_1537 | rplY | DVU_1537 | DVU_1574 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.753 |
DVU_1537 | rpmJ | DVU_1537 | DVU_1325 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.880 |
DVU_1537 | rpsF | DVU_1537 | DVU_0956 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.762 |
DVU_1537 | rpsT | DVU_1537 | DVU_1896 | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.734 |
DVU_1826 | DVU_1537 | DVU_1826 | DVU_1537 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative; Identified by match to protein family HMM PF03938. | 0.647 |
DVU_1826 | rplM | DVU_1826 | DVU_2518 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.846 |
DVU_1826 | rplU | DVU_1826 | DVU_0927 | Hypothetical protein; Identified by Glimmer2; putative. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.846 |