node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVU_1572 | DVU_1584 | DVU_1572 | DVU_1584 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.895 |
DVU_1572 | ispD | DVU_1572 | DVU_1454 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | 0.556 |
DVU_1572 | pth | DVU_1572 | DVU_1573 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.576 |
DVU_1572 | rex | DVU_1572 | DVU_0916 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | AT-rich DNA-binding protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.734 |
DVU_1572 | rplY | DVU_1572 | DVU_1574 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.522 |
DVU_1572 | rpoA | DVU_1572 | DVU_1329 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.874 |
DVU_1572 | rpoB | DVU_1572 | DVU_2928 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
DVU_1572 | rpoC | DVU_1572 | DVU_2929 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | DNA-directed RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.884 |
DVU_1572 | rpoD | DVU_1572 | DVU_1788 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth; Belongs to the sigma-70 factor family. RpoD/SigA subfamily. | 0.841 |
DVU_1572 | rpoZ | DVU_1572 | DVU_3242 | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.894 |
DVU_1584 | DVU_1572 | DVU_1584 | DVU_1572 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | 0.895 |
DVU_1584 | pth | DVU_1584 | DVU_1573 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.452 |
DVU_1584 | rplY | DVU_1584 | DVU_1574 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.423 |
DVU_1584 | rpoA | DVU_1584 | DVU_1329 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.933 |
DVU_1584 | rpoB | DVU_1584 | DVU_2928 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.939 |
DVU_1584 | rpoC | DVU_1584 | DVU_2929 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.906 |
DVU_1584 | rpoD | DVU_1584 | DVU_1788 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | RNA polymerase sigma-70 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth; Belongs to the sigma-70 factor family. RpoD/SigA subfamily. | 0.543 |
DVU_1584 | rpoZ | DVU_1584 | DVU_3242 | Sigma 70 family protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.941 |
ispD | DVU_1572 | DVU_1454 | DVU_1572 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily. | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | 0.556 |
pth | DVU_1572 | DVU_1573 | DVU_1572 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcriptional regulator, CarD family; Identified by match to protein family HMM PF02559. | 0.576 |