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paaK-2 paaK-2 DVU_1616 DVU_1616 DVU_1612 DVU_1612 DVU_0601 DVU_0601 putA putA rsfS rsfS DVU_3294 DVU_3294 DVU_1617 DVU_1617 gpmA gpmA DVU_1620 DVU_1620 DVU_3253 DVU_3253
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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paaK-2Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (435 aa)    
Predicted Functional Partners:
DVU_1616
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.789
DVU_1612
ACT domain protein; Identified by match to protein family HMM PF01842.
 
   0.706
DVU_0601
Phenylacetic acid degradation protein PaaI; Identified by similarity to SP:P76084; match to protein family HMM PF03061; match to protein family HMM TIGR00369.
 
  
 0.635
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 
 0.606
rsfS
Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.605
DVU_3294
Aldehyde dehydrogenase (NADP) family protein; Identified by match to protein family HMM PF00171.
  
 
 0.589
DVU_1617
Identified by match to protein family HMM PF00881.
  
    0.588
gpmA
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.570
DVU_1620
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.553
DVU_3253
Phenylacetate-coenzyme A ligase, putative; Identified by similarity to SP:P76085.
  
   
0.417
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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