STRINGSTRING
DVU_1651 DVU_1651 DVU_1652 DVU_1652 DVU_1650 DVU_1650 DVU_1653 DVU_1653 xerC xerC DVU_1648 DVU_1648 mutS mutS DVU_1941 DVU_1941 DVU_2932 DVU_2932
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1651Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SM00387. (123 aa)    
Predicted Functional Partners:
DVU_1652
HIT family protein; Identified by match to protein family HMM PF01230.
 
    0.924
DVU_1650
Conserved hypothetical protein; Identified by similarity to SP:P45576.
  
  
 0.808
DVU_1653
Identified by similarity to SP:P42977; match to protein family HMM PF00571; match to protein family HMM PF01368; match to protein family HMM PF01743; match to protein family HMM PF02272; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.613
xerC
Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.586
DVU_1648
Lipoprotein, putative.
  
    0.529
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
  
    0.525
DVU_1941
HAD-superfamily hydrolase, subfamily IIA; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460.
   
    0.477
DVU_2932
Conserved hypothetical protein TIGR01777; Identified by similarity to OMNI:NTL03ST2282; match to protein family HMM TIGR01777.
   
    0.469
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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