Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0484 | DVU_1668 | DVU_0484 | DVU_1668 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005. | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.783 |
| DVU_0484 | DVU_2375 | DVU_0484 | DVU_2375 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005. | Lipoprotein releasing system, permease protein; Identified by similarity to SP:P75956; match to protein family HMM PF02687. | 0.900 |
| DVU_0484 | DVU_3323 | DVU_0484 | DVU_3323 | ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.908 |
| DVU_0493 | DVU_1668 | DVU_0493 | DVU_1668 | Hypothetical protein; Identified by Glimmer2; putative. | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.673 |
| DVU_1422 | DVU_1668 | DVU_1422 | DVU_1668 | Identified by match to protein family HMM PF00691. | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.652 |
| DVU_1422 | DVU_2375 | DVU_1422 | DVU_2375 | Identified by match to protein family HMM PF00691. | Lipoprotein releasing system, permease protein; Identified by similarity to SP:P75956; match to protein family HMM PF02687. | 0.473 |
| DVU_1422 | lptD | DVU_1422 | DVU_0954 | Identified by match to protein family HMM PF00691. | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.459 |
| DVU_1667 | DVU_1668 | DVU_1667 | DVU_1668 | Identified by match to protein family HMM PF01580. | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.842 |
| DVU_1668 | DVU_0484 | DVU_1668 | DVU_0484 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005. | 0.783 |
| DVU_1668 | DVU_0493 | DVU_1668 | DVU_0493 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; Identified by Glimmer2; putative. | 0.673 |
| DVU_1668 | DVU_1422 | DVU_1668 | DVU_1422 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Identified by match to protein family HMM PF00691. | 0.652 |
| DVU_1668 | DVU_1667 | DVU_1668 | DVU_1667 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Identified by match to protein family HMM PF01580. | 0.842 |
| DVU_1668 | DVU_2371 | DVU_1668 | DVU_2371 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | N-acetylmuramoyl-L-alanine amidase, putative; Identified by match to protein family HMM PF01520. | 0.755 |
| DVU_1668 | DVU_2375 | DVU_1668 | DVU_2375 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein releasing system, permease protein; Identified by similarity to SP:P75956; match to protein family HMM PF02687. | 0.858 |
| DVU_1668 | DVU_3323 | DVU_1668 | DVU_3323 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter, permease protein; Identified by match to protein family HMM PF02687. | 0.791 |
| DVU_1668 | DVU_3324 | DVU_1668 | DVU_3324 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.783 |
| DVU_1668 | lolD | DVU_1668 | DVU_2374 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.904 |
| DVU_1668 | lptD | DVU_1668 | DVU_0954 | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Organic solvent tolerance protein, putative; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. | 0.676 |
| DVU_2371 | DVU_1668 | DVU_2371 | DVU_1668 | N-acetylmuramoyl-L-alanine amidase, putative; Identified by match to protein family HMM PF01520. | Outer membrane lipoprotein carrier protein, putative; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.755 |
| DVU_2371 | DVU_2375 | DVU_2371 | DVU_2375 | N-acetylmuramoyl-L-alanine amidase, putative; Identified by match to protein family HMM PF01520. | Lipoprotein releasing system, permease protein; Identified by similarity to SP:P75956; match to protein family HMM PF02687. | 0.454 |
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