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DVU_1671 DVU_1671 DVU_1245 DVU_1245 DVU_0747 DVU_0747 DVU_1017 DVU_1017 lpxK lpxK DVU_1672 DVU_1672 dnaK dnaK DVU_1368 DVU_1368 DVU_1673 DVU_1673 DVU_0112 DVU_0112 arsC arsC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
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[Homology]
Score
DVU_1671ABC transporter, ATP-binding protein/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. (601 aa)    
Predicted Functional Partners:
DVU_1245
ABC transporter, ATP-binding protein; Identified by similarity to SP:P45393; match to protein family HMM PF00005.
   
0.898
DVU_0747
ABC transporter, ATP-binding protein; Identified by similarity to OMNI:CC1598; match to protein family HMM PF00005.
 
  
0.892
DVU_1017
ABC transporter, ATP-binding protein/permease protein; Identified by similarity to OMNI:VCA1084; match to protein family HMM PF00005; match to protein family HMM PF00664.
 
 
0.888
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
 0.869
DVU_1672
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01FN1845; match to protein family HMM PF04028.
 
    0.847
dnaK
dnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.799
DVU_1368
Rhodanese-like domain protein; Identified by match to protein family HMM PF00581.
  
 
 0.799
DVU_1673
Acyltransferase, putative.
 
  
 0.767
DVU_0112
Deoxyribodipyrimidine photolyase, putative; Identified by similarity to SP:P05327; match to protein family HMM PF00875; match to protein family HMM PF03441.
   
 
 0.766
arsC
Arsenate reductase; Identified by similarity to SP:P45947; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.746
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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