STRINGSTRING
DVU_1707 DVU_1707 hsdM hsdM DVU_1710 DVU_1710 DVU_1708 DVU_1708 DVU_1705 DVU_1705 DVU_1703 DVU_1703 DVU_1706 DVU_1706 DVU_1704 DVU_1704
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1707Hypothetical protein; Identified by Glimmer2; putative. (69 aa)    
Predicted Functional Partners:
hsdM
Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384; match to protein family HMM PF02506; match to protein family HMM TIGR00497.
  
    0.919
DVU_1710
Conserved hypothetical protein; Identified by similarity to GP:21114103.
  
    0.901
DVU_1708
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XC0464.
  
    0.782
DVU_1705
Type I restriction-modification enzyme, S subunit; Identified by match to protein family HMM PF01420.
  
    0.770
DVU_1703
Type I restriction-modification enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.740
DVU_1706
Hypothetical protein; Identified by Glimmer2; putative.
       0.498
DVU_1704
Conserved hypothetical protein; Identified by similarity to OMNI:SAG0550.
       0.427
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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