STRINGSTRING
DVU_1728 DVU_1728 DVU_1726 DVU_1726 DVU_1727 DVU_1727 DVU_1724 DVU_1724 DVU_1721 DVU_1721 DVU_1715 DVU_1715 DVU_0949 DVU_0949 DVU_2611 DVU_2611 DVU_0863 DVU_0863 fliI fliI DVU_1714 DVU_1714
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Experiments
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[Homology]
Score
DVU_1728Conserved hypothetical protein; Identified by similarity to GP:16506030. (138 aa)    
Predicted Functional Partners:
DVU_1726
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.782
DVU_1727
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.777
DVU_1724
Phage uncharacterized protein, putative.
 
    0.766
DVU_1721
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.676
DVU_1715
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.639
DVU_0949
Conserved domain protein; Identified by similarity to OMNI:NMB1475.
  
    0.567
DVU_2611
Conserved hypothetical protein.
 
    0.542
DVU_0863
Flagellar hook-associated protein 2, putative; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.535
fliI
Flagellum-specific ATP synthase FliI; Identified by similarity to SP:P23445; match to protein family HMM PF00006; match to protein family HMM TIGR01026.
  
  
 0.533
DVU_1714
Conserved hypothetical protein; Identified by similarity to GP:13186158.
 
    0.530
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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