Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1772 | DVU_1812 | DVU_1772 | DVU_1812 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.851 |
| DVU_1772 | DVU_1814 | DVU_1772 | DVU_1814 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Cytochrome c oxidase, subunit III, putative; Identified by similarity to SP:P50677; match to protein family HMM PF00510. | 0.866 |
| DVU_1772 | DVU_1815 | DVU_1772 | DVU_1815 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Cytochrome c oxidase, subunit I, putative; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.878 |
| DVU_1772 | DVU_2484 | DVU_1772 | DVU_2484 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Identified by match to protein family HMM PF00034. | 0.657 |
| DVU_1772 | ctaB | DVU_1772 | DVU_1811 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Protoheme IX farnesyltransferase, putative; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.563 |
| DVU_1772 | poR | DVU_1772 | DVU_3025 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855. | 0.981 |
| DVU_1812 | DVU_1772 | DVU_1812 | DVU_1772 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | 0.851 |
| DVU_1812 | DVU_1813 | DVU_1812 | DVU_1813 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; Identified by Glimmer2; putative. | 0.998 |
| DVU_1812 | DVU_1814 | DVU_1812 | DVU_1814 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, subunit III, putative; Identified by similarity to SP:P50677; match to protein family HMM PF00510. | 0.999 |
| DVU_1812 | DVU_1815 | DVU_1812 | DVU_1815 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, subunit I, putative; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.999 |
| DVU_1812 | DVU_1816 | DVU_1812 | DVU_1816 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Conserved hypothetical protein; Identified by similarity to GP:10185094. | 0.994 |
| DVU_1812 | DVU_2484 | DVU_1812 | DVU_2484 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Identified by match to protein family HMM PF00034. | 0.928 |
| DVU_1812 | DVU_3107 | DVU_1812 | DVU_3107 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Identified by match to protein family HMM PF00034. | 0.878 |
| DVU_1812 | atpB | DVU_1812 | DVU_0918 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.935 |
| DVU_1812 | ctaB | DVU_1812 | DVU_1811 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Protoheme IX farnesyltransferase, putative; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
| DVU_1812 | poR | DVU_1812 | DVU_3025 | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855. | 0.786 |
| DVU_1813 | DVU_1812 | DVU_1813 | DVU_1812 | Hypothetical protein; Identified by Glimmer2; putative. | Cytochrome c oxidase, subunit II, putative; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.998 |
| DVU_1813 | DVU_1814 | DVU_1813 | DVU_1814 | Hypothetical protein; Identified by Glimmer2; putative. | Cytochrome c oxidase, subunit III, putative; Identified by similarity to SP:P50677; match to protein family HMM PF00510. | 0.996 |
| DVU_1813 | DVU_1815 | DVU_1813 | DVU_1815 | Hypothetical protein; Identified by Glimmer2; putative. | Cytochrome c oxidase, subunit I, putative; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.994 |
| DVU_1813 | DVU_1816 | DVU_1813 | DVU_1816 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by similarity to GP:10185094. | 0.948 |
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