Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_1905 | DVU_1906 | DVU_1905 | DVU_1906 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.553 |
| DVU_1905 | cheW-2 | DVU_1905 | DVU_1904 | Hypothetical protein; Identified by Glimmer2; putative. | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | 0.615 |
| DVU_1905 | mfd | DVU_1905 | DVU_1903 | Hypothetical protein; Identified by Glimmer2; putative. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.482 |
| DVU_1906 | DVU_1905 | DVU_1906 | DVU_1905 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.553 |
| DVU_1906 | cheW-2 | DVU_1906 | DVU_1904 | Hypothetical protein; Identified by Glimmer2; putative. | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | 0.418 |
| cheW-2 | DVU_1905 | DVU_1904 | DVU_1905 | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | Hypothetical protein; Identified by Glimmer2; putative. | 0.615 |
| cheW-2 | DVU_1906 | DVU_1904 | DVU_1906 | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | Hypothetical protein; Identified by Glimmer2; putative. | 0.418 |
| cheW-2 | mfd | DVU_1904 | DVU_1903 | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.591 |
| mfd | DVU_1905 | DVU_1903 | DVU_1905 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Hypothetical protein; Identified by Glimmer2; putative. | 0.482 |
| mfd | cheW-2 | DVU_1903 | DVU_1904 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Chemotaxis protein CheW; Identified by similarity to SP:P07365; match to protein family HMM PF01584. | 0.591 |