STRINGSTRING
DVU_1951 DVU_1951 DVU_1950 DVU_1950 nifA-1 nifA-1 DVU_1612 DVU_1612 aor aor DVU_1952 DVU_1952 glyA glyA poR poR aprA aprA DVU_3110 DVU_3110 fdrA fdrA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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DVU_1951Indolepyruvate ferredoxin oxidoreductase, alpha subunit, putative; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (616 aa)    
Predicted Functional Partners:
DVU_1950
Indolepyruvate ferredoxin oxidoreductase, beta subunit, putative; Identified by similarity to SP:O07836; match to protein family HMM PF01558.
 
 
 0.995
nifA-1
Nif-specific regulatory protein; Identified by similarity to SP:P27713; match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM TIGR01199.
  
  
 0.815
DVU_1612
ACT domain protein; Identified by match to protein family HMM PF01842.
 
    0.716
aor
Aldehyde:ferredoxin oxidoreductase, tungsten-containing; Identified by similarity to SP:Q51739; match to protein family HMM PF01314; match to protein family HMM PF02730.
   
  
 0.703
DVU_1952
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.684
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism; Belongs to the SHMT family.
  
  
 0.627
poR
Pyruvate-ferredoxin oxidoreductase; Identified by similarity to GP:1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855.
  
 
 0.616
aprA
Adenylyl-sulphate reductase, alpha subunit; Identified by similarity to GP:7109235; match to protein family HMM TIGR02061.
  
 
 0.601
DVU_3110
L-aspartate oxidase, putative; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910.
   
 
 0.584
fdrA
Fumarate reductase, flavoprotein subunit; Identified by similarity to GP:13160058; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.
   
 
 0.584
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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