Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0664 | DVU_0665 | DVU_0664 | DVU_0665 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.999 |
| DVU_0664 | DVU_1964 | DVU_0664 | DVU_1964 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.776 |
| DVU_0665 | DVU_0664 | DVU_0665 | DVU_0664 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.999 |
| DVU_0665 | DVU_1964 | DVU_0665 | DVU_1964 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.848 |
| DVU_1964 | DVU_0664 | DVU_1964 | DVU_0664 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily. | 0.776 |
| DVU_1964 | DVU_0665 | DVU_1964 | DVU_0665 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.848 |
| DVU_1964 | DVU_1965 | DVU_1964 | DVU_1965 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Hypothetical protein; Identified by Glimmer2; putative. | 0.562 |
| DVU_1964 | DVU_2414 | DVU_1964 | DVU_2414 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Hypothetical protein; Identified by Glimmer2; putative. | 0.477 |
| DVU_1964 | fliG | DVU_1964 | DVU_0312 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Flagellar motor switch protein FliG; Identified by similarity to SP:P23448; match to protein family HMM PF01706; match to protein family HMM TIGR00207. | 0.522 |
| DVU_1964 | ftsZ | DVU_1964 | DVU_2499 | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.437 |
| DVU_1965 | DVU_1964 | DVU_1965 | DVU_1964 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.562 |
| DVU_2414 | DVU_1964 | DVU_2414 | DVU_1964 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.477 |
| fliG | DVU_1964 | DVU_0312 | DVU_1964 | Flagellar motor switch protein FliG; Identified by similarity to SP:P23448; match to protein family HMM PF01706; match to protein family HMM TIGR00207. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.522 |
| ftsZ | DVU_1964 | DVU_2499 | DVU_1964 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Transcriptional regulator, rrf2 protein, putative; Identified by similarity to SP:P33395; match to protein family HMM PF02082; match to protein family HMM TIGR00738. | 0.437 |