Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0070 | DVU_1999 | DVU_0070 | DVU_1999 | Identified by match to protein family HMM PF00149. | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.748 |
| DVU_0070 | DVU_2041 | DVU_0070 | DVU_2041 | Identified by match to protein family HMM PF00149. | Conserved hypothetical protein; Identified by similarity to GP:20095150. | 0.755 |
| DVU_0070 | DVU_2561 | DVU_0070 | DVU_2561 | Identified by match to protein family HMM PF00149. | Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.754 |
| DVU_0070 | DVU_3144 | DVU_0070 | DVU_3144 | Identified by match to protein family HMM PF00149. | Cytochrome c family protein. | 0.436 |
| DVU_0070 | fabG | DVU_0070 | DVU_1206 | Identified by match to protein family HMM PF00149. | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.749 |
| DVU_1998 | DVU_1999 | DVU_1998 | DVU_1999 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.628 |
| DVU_1999 | DVU_0070 | DVU_1999 | DVU_0070 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Identified by match to protein family HMM PF00149. | 0.748 |
| DVU_1999 | DVU_1998 | DVU_1999 | DVU_1998 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Hypothetical protein; Identified by Glimmer2; putative. | 0.628 |
| DVU_1999 | DVU_2041 | DVU_1999 | DVU_2041 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Conserved hypothetical protein; Identified by similarity to GP:20095150. | 0.523 |
| DVU_1999 | DVU_2306 | DVU_1999 | DVU_2306 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Identified by similarity to GP:15026158; match to protein family HMM PF01384. | 0.750 |
| DVU_1999 | DVU_2561 | DVU_1999 | DVU_2561 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. | 0.524 |
| DVU_1999 | DVU_2562 | DVU_1999 | DVU_2562 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Acyl carrier protein, putative; Identified by similarity to SP:P20804. | 0.595 |
| DVU_1999 | DVU_2958 | DVU_1999 | DVU_2958 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.716 |
| DVU_1999 | DVU_3144 | DVU_1999 | DVU_3144 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Cytochrome c family protein. | 0.735 |
| DVU_1999 | acpP | DVU_1999 | DVU_1205 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.588 |
| DVU_1999 | fabG | DVU_1999 | DVU_1206 | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.515 |
| DVU_2041 | DVU_0070 | DVU_2041 | DVU_0070 | Conserved hypothetical protein; Identified by similarity to GP:20095150. | Identified by match to protein family HMM PF00149. | 0.755 |
| DVU_2041 | DVU_1999 | DVU_2041 | DVU_1999 | Conserved hypothetical protein; Identified by similarity to GP:20095150. | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.523 |
| DVU_2306 | DVU_1999 | DVU_2306 | DVU_1999 | Identified by similarity to GP:15026158; match to protein family HMM PF01384. | Identified by similarity to OMNI:VC2031; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.750 |
| DVU_2306 | DVU_2958 | DVU_2306 | DVU_2958 | Identified by similarity to GP:15026158; match to protein family HMM PF01384. | Membrane protein, putative; Identified by match to protein family HMM PF01925. | 0.711 |
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