STRINGSTRING
DVU_2027 DVU_2027 DVU_2026 DVU_2026 DVU_2025 DVU_2025 DVU_2021 DVU_2021 DVU_2023 DVU_2023 DVU_2020 DVU_2020 DVU_2022 DVU_2022 DVU_2024 DVU_2024 DVU_2019 DVU_2019
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2027Hypothetical protein; Identified by Glimmer2; putative. (104 aa)    
Predicted Functional Partners:
DVU_2026
Conserved hypothetical protein; Identified by similarity to GP:19916320.
  
    0.513
DVU_2025
Conserved hypothetical protein; Identified by similarity to GP:19882263; match to protein family HMM TIGR01612.
  
    0.503
DVU_2021
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.502
DVU_2023
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.501
DVU_2020
Conserved hypothetical protein; Identified by similarity to GP:20095133.
       0.499
DVU_2022
Conserved hypothetical protein; Identified by similarity to GP:28629295.
       0.499
DVU_2024
Conserved hypothetical protein; Identified by similarity to OMNI:NMB2085.
       0.499
DVU_2019
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02MA2298.
       0.483
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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