Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_0241 | DVU_0665 | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.668 |
| DVU_0241 | DVU_2103 | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | 0.767 |
| DVU_0241 | DVU_2104 | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | 0.779 |
| DVU_0241 | DVU_2108 | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | Identified by match to protein family HMM PF02579. | 0.739 |
| DVU_0241 | DVU_2984 | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | Conserved hypothetical protein; Identified by similarity to OMNI:NTL01AA00614; match to protein family HMM PF01937. | 0.567 |
| DVU_0665 | DVU_0241 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | 0.668 |
| DVU_0665 | DVU_2103 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | 0.543 |
| DVU_0665 | DVU_2104 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | 0.545 |
| DVU_0665 | DVU_2107 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Hypothetical protein; Identified by Glimmer2; putative. | 0.614 |
| DVU_0665 | DVU_2108 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Identified by match to protein family HMM PF02579. | 0.638 |
| DVU_0665 | DVU_2109 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | MTH1175-like domain family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.799 |
| DVU_0665 | DVU_3054 | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.402 |
| DVU_2103 | DVU_0241 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Identified by similarity to SP:P10390; match to protein family HMM PF02579. | 0.767 |
| DVU_2103 | DVU_0665 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Nitrogen fixation protein nifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins; Belongs to the NifU family. | 0.543 |
| DVU_2103 | DVU_2104 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | 0.948 |
| DVU_2103 | DVU_2105 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Hypothetical protein; Identified by Glimmer2; putative. | 0.950 |
| DVU_2103 | DVU_2106 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM TIGR00229; match to protein family HMM TIGR01199. | 0.739 |
| DVU_2103 | DVU_2107 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Hypothetical protein; Identified by Glimmer2; putative. | 0.743 |
| DVU_2103 | DVU_2108 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | Identified by match to protein family HMM PF02579. | 0.976 |
| DVU_2103 | DVU_2109 | Iron-sulfur cluster-binding/ATPase domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF00991. | MTH1175-like domain family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.917 |
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