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DVU_2155 DVU_2155 DVU_2154 DVU_2154 DVU_2153 DVU_2153 DVU_2157 DVU_2157 DVU_2152 DVU_2152 DVU_2151 DVU_2151 DVU_1490 DVU_1490 DVU_1488 DVU_1488 DVU_2156 DVU_2156 DVU_1487 DVU_1487 DVU_2171 DVU_2171
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2155Hypothetical protein; Identified by Glimmer2; putative. (141 aa)    
Predicted Functional Partners:
DVU_2154
Tail assembly protein, putative; Identified by match to protein family HMM PF00877.
  
    0.856
DVU_2153
Tail fiber protein, putative.
  
    0.841
DVU_2157
Tail tape meausure protein, putative.
  
    0.831
DVU_2152
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.791
DVU_2151
Conserved hypothetical protein; Identified by similarity to SP:P54342.
  
    0.783
DVU_1490
Tail tape measure protein, putative.
  
    0.748
DVU_1488
Minor tail protein, putative.
  
  
 0.690
DVU_2156
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.599
DVU_1487
Conserved domain protein.
  
    0.443
DVU_2171
Portal protein; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.
  
    0.431
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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