Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_0039 | DVU_2166 | C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258. | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | 0.480 |
| DVU_0039 | DVU_2193 | C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258. | Hypothetical protein; Identified by Glimmer2; putative. | 0.647 |
| DVU_0039 | DVU_2194 | C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258. | Hypothetical protein; Identified by Glimmer2; putative. | 0.727 |
| DVU_2166 | DVU_0039 | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | C4-type zinc finger protein, DksA/TraR family; Identified by match to protein family HMM PF01258. | 0.480 |
| DVU_2166 | DVU_2168 | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | Major head protein; Identified by match to protein family HMM PF03864. | 0.622 |
| DVU_2166 | DVU_2193 | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | Hypothetical protein; Identified by Glimmer2; putative. | 0.737 |
| DVU_2166 | DVU_2194 | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | Hypothetical protein; Identified by Glimmer2; putative. | 0.697 |
| DVU_2168 | DVU_2166 | Major head protein; Identified by match to protein family HMM PF03864. | Holin; Identified by match to protein family HMM PF05105; match to protein family HMM TIGR01593. | 0.622 |
| DVU_2168 | DVU_2188 | Major head protein; Identified by match to protein family HMM PF03864. | Primase, putative; Identified by match to protein family HMM PF01751; match to protein family HMM PF03288; match to protein family HMM TIGR01613. | 0.497 |
| DVU_2168 | DVU_2193 | Major head protein; Identified by match to protein family HMM PF03864. | Hypothetical protein; Identified by Glimmer2; putative. | 0.523 |
| DVU_2187 | DVU_2193 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.708 |
| DVU_2188 | DVU_2168 | Primase, putative; Identified by match to protein family HMM PF01751; match to protein family HMM PF03288; match to protein family HMM TIGR01613. | Major head protein; Identified by match to protein family HMM PF03864. | 0.497 |
| DVU_2188 | DVU_2193 | Primase, putative; Identified by match to protein family HMM PF01751; match to protein family HMM PF03288; match to protein family HMM TIGR01613. | Hypothetical protein; Identified by Glimmer2; putative. | 0.582 |
| DVU_2191 | DVU_2192 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.795 |
| DVU_2191 | DVU_2193 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.764 |
| DVU_2191 | DVU_2194 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.672 |
| DVU_2191 | DVU_2195 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.574 |
| DVU_2191 | DVU_2196 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.503 |
| DVU_2192 | DVU_2191 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.795 |
| DVU_2192 | DVU_2193 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.710 |
page 1 of 3