STRINGSTRING
DVU_2194 DVU_2194 DVU_2193 DVU_2193 amiE amiE DVU_2715 DVU_2715 DVU_1495 DVU_1495 DVU_1487 DVU_1487 DVU_1496 DVU_1496 DVU_2733 DVU_2733 DVU_1723 DVU_1723 DVU_2195 DVU_2195 DVU_1717 DVU_1717
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2194Hypothetical protein; Identified by Glimmer2; putative. (229 aa)    
Predicted Functional Partners:
DVU_2193
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.895
amiE
Aliphatic amidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family.
   
    0.846
DVU_2715
Conserved hypothetical protein; Identified by similarity to OMNI:NMB1103.
   
    0.819
DVU_1495
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.805
DVU_1487
Conserved domain protein.
   
    0.798
DVU_1496
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.798
DVU_2733
Adenine specific DNA methyltransferase, putative; Identified by match to protein family HMM PF01555; Belongs to the N(4)/N(6)-methyltransferase family.
   
    0.795
DVU_1723
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.791
DVU_2195
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.782
DVU_1717
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.763
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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