Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_2225 | DVU_2245 | DVU_2225 | DVU_2245 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 0.467 |
| DVU_2225 | birA | DVU_2225 | DVU_2557 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.702 |
| DVU_2225 | polA | DVU_2225 | DVU_0496 | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | DNA polymerase I; Identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593. | 0.582 |
| DVU_2245 | DVU_2225 | DVU_2245 | DVU_2225 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | 0.467 |
| DVU_2245 | argH | DVU_2245 | DVU_1094 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | Argininosuccinate lyase; Identified by similarity to SP:O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. | 0.903 |
| DVU_2245 | birA | DVU_2245 | DVU_2557 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.430 |
| DVU_2245 | glgA | DVU_2245 | DVU_2244 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.728 |
| DVU_2245 | glgB | DVU_2245 | DVU_2243 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.686 |
| DVU_2245 | polA | DVU_2245 | DVU_0496 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | DNA polymerase I; Identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593. | 0.503 |
| DVU_2245 | suhB | DVU_2245 | DVU_1680 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | Inositol-1-monophosphatase; Identified by similarity to SP:P22783; match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | 0.866 |
| argH | DVU_2245 | DVU_1094 | DVU_2245 | Argininosuccinate lyase; Identified by similarity to SP:O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 0.903 |
| birA | DVU_2225 | DVU_2557 | DVU_2225 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | 0.702 |
| birA | DVU_2245 | DVU_2557 | DVU_2245 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 0.430 |
| birA | glgB | DVU_2557 | DVU_2243 | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.411 |
| glgA | DVU_2245 | DVU_2244 | DVU_2245 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 0.728 |
| glgA | glgB | DVU_2244 | DVU_2243 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.999 |
| glgB | DVU_2245 | DVU_2243 | DVU_2245 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. | 0.686 |
| glgB | birA | DVU_2243 | DVU_2557 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | birA bifunctional protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.411 |
| glgB | glgA | DVU_2243 | DVU_2244 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.999 |
| polA | DVU_2225 | DVU_0496 | DVU_2225 | DNA polymerase I; Identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593. | acetyl-CoA carboxylase, carboxyl transferase, alpha/beta subunit. | 0.582 |
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