Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVU_0588 | DVU_1772 | DVU_0588 | DVU_1772 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | 0.919 |
| DVU_0588 | DVU_2481 | DVU_0588 | DVU_2481 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | 0.904 |
| DVU_0588 | DVU_2811 | DVU_0588 | DVU_2811 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | Formate dehydrogenase, beta subunit, putative; Beta chain of the formate dehydrogenase (FDH) that catalyzes the reversible two-electron oxidation of formate to carbon dioxide. The beta chain is an electron transfer unit. | 0.903 |
| DVU_0588 | cooF | DVU_0588 | DVU_2293 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | Iron-sulfur protein CooF; Identified by similarity to SP:P31894; match to protein family HMM PF00037. | 0.973 |
| DVU_0588 | cooS | DVU_0588 | DVU_2098 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | Carbon monoxide dehydrogenase; Identified by similarity to SP:P31896. | 0.904 |
| DVU_0588 | hydC | DVU_0588 | DVU_1771 | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | [Fe] hydrogenase gamma; Identified by similarity to GP:40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906. | 0.591 |
| DVU_1772 | DVU_0588 | DVU_1772 | DVU_0588 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | 0.919 |
| DVU_1772 | DVU_2289 | DVU_1772 | DVU_2289 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Hydrogenase, CooX subunit, putative; Identified by match to protein family HMM PF00037. | 0.937 |
| DVU_1772 | DVU_2481 | DVU_1772 | DVU_2481 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Formate dehydrogenase, beta subunit, putative; Identified by similarity to SP:P32175. | 0.919 |
| DVU_1772 | DVU_2811 | DVU_1772 | DVU_2811 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Formate dehydrogenase, beta subunit, putative; Beta chain of the formate dehydrogenase (FDH) that catalyzes the reversible two-electron oxidation of formate to carbon dioxide. The beta chain is an electron transfer unit. | 0.921 |
| DVU_1772 | cooF | DVU_1772 | DVU_2293 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Iron-sulfur protein CooF; Identified by similarity to SP:P31894; match to protein family HMM PF00037. | 0.947 |
| DVU_1772 | cooS | DVU_1772 | DVU_2098 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | Carbon monoxide dehydrogenase; Identified by similarity to SP:P31896. | 0.937 |
| DVU_1772 | hydC | DVU_1772 | DVU_1771 | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | [Fe] hydrogenase gamma; Identified by similarity to GP:40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906. | 0.999 |
| DVU_2288 | DVU_2289 | DVU_2288 | DVU_2289 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | Hydrogenase, CooX subunit, putative; Identified by match to protein family HMM PF00037. | 0.999 |
| DVU_2288 | DVU_2291 | DVU_2288 | DVU_2291 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | Carbon monoxide-induced hydrogenase CooH, putative; Identified by similarity to SP:P31895; match to protein family HMM PF00346. | 0.999 |
| DVU_2288 | cooF | DVU_2288 | DVU_2293 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | Iron-sulfur protein CooF; Identified by similarity to SP:P31894; match to protein family HMM PF00037. | 0.966 |
| DVU_2288 | cooS | DVU_2288 | DVU_2098 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | Carbon monoxide dehydrogenase; Identified by similarity to SP:P31896. | 0.579 |
| DVU_2288 | hydC | DVU_2288 | DVU_1771 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | [Fe] hydrogenase gamma; Identified by similarity to GP:40828; match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906. | 0.844 |
| DVU_2288 | hypA | DVU_2288 | DVU_2292 | Hydrogenase, CooL subunit, putative; Identified by similarity to GP:1515468; match to protein family HMM PF01058. | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.851 |
| DVU_2289 | DVU_1772 | DVU_2289 | DVU_1772 | Hydrogenase, CooX subunit, putative; Identified by match to protein family HMM PF00037. | Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070. | 0.937 |
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