Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| DVU_2298 | DVU_2299 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.999 |
| DVU_2298 | DVU_2300 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Hypothetical protein; Identified by Glimmer2; putative. | 0.546 |
| DVU_2298 | DVU_2301 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Lipoprotein, putative. | 0.477 |
| DVU_2298 | DVU_2302 | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI:NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.421 |
| DVU_2299 | DVU_2298 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.999 |
| DVU_2299 | DVU_2300 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | Hypothetical protein; Identified by Glimmer2; putative. | 0.535 |
| DVU_2299 | DVU_2301 | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | Lipoprotein, putative. | 0.477 |
| DVU_2300 | DVU_2298 | Hypothetical protein; Identified by Glimmer2; putative. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.546 |
| DVU_2300 | DVU_2299 | Hypothetical protein; Identified by Glimmer2; putative. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.535 |
| DVU_2300 | DVU_2301 | Hypothetical protein; Identified by Glimmer2; putative. | Lipoprotein, putative. | 0.752 |
| DVU_2300 | DVU_2302 | Hypothetical protein; Identified by Glimmer2; putative. | Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI:NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.555 |
| DVU_2300 | DVU_2303 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein. | 0.415 |
| DVU_2300 | DVU_2304 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.415 |
| DVU_2301 | DVU_2298 | Lipoprotein, putative. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.477 |
| DVU_2301 | DVU_2299 | Lipoprotein, putative. | glycine/betaine/L-proline ABC transporter, ATP binding protein; Identified by similarity to SP:P17328; match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186. | 0.477 |
| DVU_2301 | DVU_2300 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.752 |
| DVU_2301 | DVU_2302 | Lipoprotein, putative. | Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI:NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.576 |
| DVU_2301 | DVU_2303 | Lipoprotein, putative. | Conserved domain protein. | 0.435 |
| DVU_2301 | DVU_2304 | Lipoprotein, putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.415 |
| DVU_2302 | DVU_2298 | Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI:NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | glycine/betaine/L-proline ABC transporter, permease protein; Identified by similarity to SP:P46921; match to protein family HMM PF00528. | 0.421 |
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