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DVU_2304 DVU_2304 DVU_2303 DVU_2303 DVU_2306 DVU_2306 DVU_2305 DVU_2305 DVU_2302 DVU_2302 DVU_2300 DVU_2300 DVU_2301 DVU_2301
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2304Hypothetical protein; Identified by Glimmer2; putative. (78 aa)    
Predicted Functional Partners:
DVU_2303
Conserved domain protein.
       0.752
DVU_2306
Identified by similarity to GP:15026158; match to protein family HMM PF01384.
  
    0.561
DVU_2305
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01RS1312; match to protein family HMM PF01865.
  
    0.560
DVU_2302
Glutathione-regulated potassium-efflux system protein KefB, putative; Identified by similarity to OMNI:NTL01MM0929; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
       0.547
DVU_2300
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.415
DVU_2301
Lipoprotein, putative.
       0.415
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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